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Sustainable Bacterial Control of Hatching Eggshells Using Essential Oils

Published: June 6, 2025
By: Igor Rafael Ribeiro Vale 1, Gabriel da Silva Oliveira 2, Luana Maria de Jesus 1, Marcio Botelho de Castro 2, Concepta McManus 3 and Vinícius Machado dos Santos 1.
Summary

Author details:

1 Laboratory of Poultry Science, Federal Institute of Brasília—Campus Planaltina, Brasília 73380-900, Brazil; 2 Faculty of Agronomy and Veterinary Medicine, University of Brasília, Brasília 70910-900, Brazil; 3 Center for Nuclear Energy in Agriculture (CENA), University of São Paulo, São Paulo 13416-000, Brazil.

Abstract: Background: Decontamination of poultry surfaces through appropriate hygiene and sanitation measures can partially mitigate bacterial problems, as this process does not result in the complete elimination of bacteria. Thus, the remaining bacteria can persist and contaminate eggshells. Therefore, regardless of the rigor of the sanitary standards applied on farms, it is suggested that hatching eggs be subjected to the sanitization process. Here, we investigated the effectiveness of essential oil-based antibacterial agents in sanitizing eggs. Results: The results indicated that essential oils from Cinnamomum cassia (L.) J. Presl. (CCEO), Syzygium aromaticum (L.) Merr. & L.M. Perry (SAEO) and Cymbopogon nardus (L.) Rendle (CNEO), at specific concentrations, have antibacterial effects in vitro, reducing the load of mesophilic bacteria and enterobacteria in the eggshell by at least 3 and 2 log10 CFU/mL, respectively. Conclusion: The adoption of CCEO, SAEO and CNEO to reduce the bacterial load on eggshells could be a favorable change to the conventional protocol of egg sanitization with formaldehyde, especially on farms where sanitary standards are insufficient.

Keywords: egg sanitization; essential oils; green antibacterials; hatching eggs; poultry; sanitizers

1. Introduction

The surface of eggshells can be contaminated by bacteria such as Escherichia coli and Staphylococcus spp., which may account for 84% and 77% of the present Gram-negative and Gram-positive bacteria, respectively [1]. In addition to antibiotic resistance [1], Escherichia coli and Staphylococcus spp. (e.g., Staphylococcus aureus) may also be associated with the death of chicken embryos [2,3]. Eggs appear to be quite vulnerable to several threats, even biofilm contamination [4]. Regardless of the level of bacterial contamination present on the eggshell, which can be influenced by the location of egg deposition, synthetic chemical sanitation remains the main approach for decontamination. On a global scale, formaldehyde is the predominant active agent [5,6]. Formaldehyde demonstrates cuttingedge effectiveness, surpassing many sanitizers available on the market. However, its efficiency is concomitant with significant toxicity to humans and animals, which raises a red alert in the scientific community [7–9]. Advanced antibacterials that combine high efficiency with minimal toxicity represent a strategic attempt to demonstrate to the industry the need to overcome the problems associated with the use of formaldehyde. Hydrogen peroxide and Virkon S are among the potential alternative synthetic chemicals for sanitizing hatching eggs [6]. The viability of a sanitizer must be assessed not only by its efficiency and cost but also, above all, by its impact on human safety. The instruments provided by nature, when used properly, proved to be a preferable way to overcome this unhealthiness.
Unsurprisingly, essential oils are natural bioactive substances extracted from plants. However, the surprisingly versatile spectrum of their biological potential for both human and animal health [10–12] continues to dazzle research centers and industry in general. Although essential oils are considered safe and are linked to benefits for living and nonliving organisms, they are not free from toxicity, mainly due to their composition [13,14]. The essential oil extracted from Cinnamomum cassia (L.) J. Presl. (cinnamon) plants can be characterized by a clear liquid appearance and a yellow color. It has a characteristic odor and can have a density of 1.053 g/cm³ at 20 ◦C and a refractive index of 1.609 at 20 ◦C. This oil is composed of a variety of substances, including cinnamic aldehyde, o-methoxy cinnamaldehyde, cinnamyl acetate and benzaldehyde [15]. The essential oil obtained from the Syzygium aromaticum (L.) Merr. & L.M. Perry, syn. Eugenia caryophyllus (Spreng.) Bullock & S.G. Harrison (clove) plant is characterized by its clear appearance and color, which varies from pale yellow to yellow. Its density can reach 1.038 g/cm³ at 20 ◦C, and its refractive index can reach 1.530 at 20 ◦C. This oil is composed of a chemical configuration that includes 3-allyl-6-methoxyphenol, eugenol acetate, 2-pentanone, 4-hydroxy-4-methyl and caryophyllene [16]. The essential oil extracted from the Cymbopogon nardus (L.) Rendle (citronella) plant, like the previous oils, normally has a yellowish color. Its density at 20 ◦C can reach 0.892 g/cm³, and the refractive index at 20 ◦C can reach 1.469. The chemical contents of this oil include ammonium carbamate, carbinol, neophytadiene, trans-geraniol, phenol-methoxy, norolean, benzofuran, guaiacol, hexadecen-phytol, β-citronellol, transcaryophyllene, alphahumulene and valerol [17]. The in vitro antibacterial activities of the three essential oils have been documented in previous studies (Table 1).
Table 1. Summary of the in vitro antibacterial activities of Cinnamomum cassia (CCEO), Syzygium aromaticum (SAEO) and Cymbopogon nardus (CNEO) essential oils.
Table 1. Summary of the in vitro antibacterial activities of Cinnamomum cassia (CCEO), Syzygium aromaticum (SAEO) and Cymbopogon nardus (CNEO) essential oils.
The use of essential oils to combat the formation of biofilms by foodborne pathogenic bacteria has shown great promise [26]. In this context, studies have also demonstrated that Cinnamomum cassia (CCEO), Syzygium aromaticum (SAEO) and Cymbopogon nardus (CNEO), applied directly or incorporated as active ingredients in biopolymeric films and coatings before application to food, can ensure microbiological quality and food preservation [27–29]. These three essential oils have been classified as Generally Recognized as Safe (GRAS) [30,31]. The present study aims to elucidate the antibacterial profiles of CCEO, SAEO and CNEO when they are applied to the surface of eggshells. Previous studies have demonstrated the in vitro antibacterial benefits of these essential oils. Our objective is to expand this knowledge by investigating its antibacterial properties in conditions closer to practical applications for sanitizing hatching eggs.

2. Materials and Methods

CCEO, SAEO and CNEO were obtained commercially (BioEssência®, São Paulo, Brazil). The specifications for each essential oil are described in Table 2. After acquisition, the essential oils, stored in appropriate vials, were maintained in a controlled refrigeration chamber at 4 ◦C until use.
Table 2. Specifications of commercially acquired essential oils from Cinnamomum cassia (CCEO), Syzygium aromaticum (SAEO) and Cymbopogon nardus (CNEO).
In summary, sterile white discs of 6 mm impregnated with 10 µL of CCEO, SAEO, or CNEO, both pure and diluted in dimethyl sulfoxide (600–0.005 mg/mL), were evaluated for their ability to inhibit the growth of Escherichia coli (ATCC 25922; E. coli) and Staphylococcus aureus (ATCC 25923; S. aureus) via the disc diffusion method [32]. First, the bacteria were activated in brain heart infusion broth and incubated for 24 h at 36 ◦C. After this period, each bacterial inoculum was standardized in a sterile saline solution (0.85% NaCl) to a turbidity equivalent to 0.5 on the McFarland scale. Then, we tested whether the essential oils, diluted in dimethyl sulfoxide at a concentration of 600 mg/mL, exhibited activity against both strains, using this as the starting point for further dilutions. After confirming activity, serial dilutions were performed to the greatest extent possible. For control purposes, discs impregnated with 15 µg of azithromycin (Laborclin, Paraná, Brazil) and discs impregnated with pure dimethyl sulfoxide were also used. The inhibitory efficacy of each concentration was tested in triplicate and determined by the presence of inhibition zones after 24 h of incubation of the plates at 36 ◦C.
The inhibitory concentrations of the essential oils, which were determined via the disk diffusion method, were subjected to a broth dilution technique [33] to confirm their efficacy, which was carried out in triplicate. These serial dilutions of essential oils were prepared in test tubes with Mueller–Hinton broth and accompanied by a negative control, which was free of any essential oil. The tubes were incubated at 36 ◦C for a period of 24 h. After incubation, bacterial growth inhibition was assessed based on the presence or absence of turbidity [33].
The eggs used in this study were non-fertile, an intentional choice considering that the focus was exclusively on external microbiological parameters. The use of non-fertile eggs eliminates any variables associated with embryonic development and, therefore, does not require approval from animal ethics committees. However, this approach allows us to gain clear insight into the relationship between the effects of essential oils on the bacteria present in the shell, with potential implications for embryo protection in future studies. These eggs were collected and selected from a poultry production system of the Embrapa 051 lineage (Planaltina, Federal District, Brazil). The eggs were randomly distributed into six different treatment groups, as described in Table 3.
Table 3. Details of egg application procedures.
Table 3. Details of egg application procedures.
Sanitizers based on essential oils were formulated by diluting the oils in 93.8% grain alcohol, using the lowest concentration that demonstrated efficacy against both bacteria tested in the in vitro assay (see results topic). As this alcohol acted as a vehicle for essential oils, its isolated use was also tested in eggs. The sanitizers were individually sprayed on the eggs (~2.5–3 mL/egg) until the entire shell was completely covered.
For an accurate assessment of total aerobic mesophilic bacteria and Enterobacteriaceae, six eggs from a non-sanitized group and sanitized groups were subjected to a washing procedure. Each egg was washed individually in sterile plastic bags (Labplas, Quebec, Canada) containing 75 mL of 0.1% peptone water for a period of 2 minutes. With the egg submerged in water and the bag sealed, the egg was gently massaged over its entire surface. The solutions resulting from washing were then subjected to serial decimal dilutions in 0.1% peptone water solution. Subsequently, aliquots of 100 µL of each dilution were seeded via the Drigalsky loop spreading technique in sextuplicate on plates containing count agar (Laborclin, Paraná, Brazil) and violet red bile glucose agar (Laborclin, Paraná, Brazil). The plates were incubated at 36 ◦C for 48 h. The colonies were counted and the results were log10 transformed.
For in vitro antibacterial analysis and bacterial counts in eggshells, a completely randomized design was used with triplicate and sextuplicate samples, respectively. The results of the microbiological analyses were subjected to an analysis of variance (PROC GLM) and compared via the Tukey test, with a significance level of 5%. The entire statistical process was conducted in SAS Studio 9.4 University Edition software (SAS Institute Inc., Cary, NC, USA).

3. Results

This study investigated the inhibition potential of three essential oils against E. coli and S. aureus. The concentrations of CCEO, SAEO and CNEO, which are capable of inhibiting both bacterial strains, were determined via the disk diffusion method and were between 600 and 0.59 mg/mL, 600 and 4.69 mg/mL and 600 and 0.59 mg/mL, respectively (Table 4). The average inhibition zone for the positive control, azithromycin (15 µg), was 23.73 ± 2.43 mm for E. coli and 21.00 ± 1.73 mm for S. aureus. To ensure the reliability of the results obtained via the disk diffusion method, the concentrations of each essential oil that inhibited both bacteria were also subjected to the broth dilution method. The results demonstrated a complete absence of bacterial growth at all concentrations tested, except in the negative controls (without the presence of diluted essential oil). The minimum inhibitory concentrations of CCEO, SAEO and CNEO, which were determined to be 0.59 mg/mL, 4.69 mg/mL and 0.59 mg/mL, respectively, were selected to evaluate their effectiveness in the sanitization of eggshells.
Table 4. Inhibition halos of essential oils against the two bacterial strains.
The eggshells analyzed presented counts of aerobic mesophilic bacteria ranging from 4.96 to 1.01 log10 CFU/mL (Table 5). Sanitizing eggs with essential oils reduced eggshell bacterial levels by at least 3 log10 of non-sanitized eggs. The enterobacterial count ranged from 2.24 to 1.20 log10 CFU/mL. Eggs treated with essential oils did not show a detectable presence of enterobacteria, indicating superior efficacy compared with formaldehyde in eliminating this bacterial group.
Table 5. Bacterial counts on eggshells after sanitization protocols 1
Table 5. Bacterial counts on eggshells after sanitization protocols 1
4. Discussion
The antibacterial activity of essential oils is of scientific interest, as proven by the substantial number of published studies. A recent analysis in the Scopus database, which uses the terms "(TITLE-ABS-KEY (antibacterial AND activity AND essential AND oils) OR TITLE-ABS-KEY (poultry)", revealed a total of 60,526 publications in the last five years. When the search was restricted with the keyword "poultry and eggs", we identified 17,180 publications. These data highlight the appreciation of the antibacterial benefits of essential oils in poultry. This trend highlights the commitment of research centers to officially integrate these natural compounds into poultry production. One of the objectives pursued by researchers is to encourage the use of essential oils in the sanitization of hatching eggs [35].
In this study, essential oils inhibited both Gram-positive and Gram-negative bacterial strains. Here, we recorded significant inhibition halos against E. coli and S. aureus on discs impregnated with CCEO, SAEO and CNEO via the disc diffusion method. These results were corroborated by the broth dilution method. These results are in line with previous studies that, in addition to CCEO, SAEO and CNEO, also documented the in vitro antibacterial effectiveness of other essential oils against the same bacterial strains [18,19,22,24,25,36]. Aouadhi et al. [37] suggested that essential oils can induce significant disturbances in the permeability and integrity of the bacterial cell membrane. These effects result in the leakage of DNA and proteins from the bacterial cytoplasm. Many existing publications reveal that Gram-negative bacteria are perceived as more resistant to essential oils because of their morphological structure, particularly the presence of an external lipopolysaccharide membrane [38]. However, the results obtained in this study challenge this conception, indicating a greater sensitivity of Gram-negative bacteria than of Gram-positive bacteria when exposed to essential oils. This finding reveals the need to avoid hasty generalizations when one bacterial group is more sensitive to essential oils than another. For example, while Lopez-Romero et al. [39] observed that Gram-positive bacteria were more resistant to essential oils, Ribeiro et al. [40] found that Gram-negative bacteria were more resistant.
CCEO, SAEO and CNEO have demonstrated efficacy in inhibiting bacterial growth on eggshells. In the study by Oliveira et al. [41] on the bacteriological count of eggs sanitized with essential oils from Ocimum basilicum, Citrus aurantifolia and Allium sativum, the counts of mesophilic bacteria ranged from 3.09 ± 0.23 to 1.87 ± 0.54 log10 CFU/mL. No enterobacteria were detected in eggs sanitized with Citrus aurantifolia or Allium sativum, whereas for Ocimum basilicum, the enterobacterial count was 1.02 ± 0.89 log10 CFU/mL. All the results obtained for eggs sanitized with essential oils were significantly lower than those obtained for non-sanitized eggs, which presented mesophilic bacteria counts of 5.12 ± 0.10 log10 CFU/mL and enterobacteria counts of 3.25 ± 0.75 log10 CFU/mL. The effectiveness of essential oils in reducing bacteriological counts in eggshells was also reported in the study by Mustafa et al. [42]. Bacteria can become nonviable when they interact with essential oils, as previously stated by Aouadhi et al. [37]. Our sustainable plan for sanitizing eggs using essential oils, similar to industry practices, provides cutting-edge training and paves the way for future commercial applications. This plan proposes a viable and conscientious solution based on renewable resources for natural sanitization in poultry farming. It addresses the demand for solutions that minimize environmental impacts while also providing opportunities to promote and encourage the development of a more sustainable poultry sanitizer market. In addition to its proven effectiveness in reducing bacterial load on eggshells, several factors may favor the adoption of this natural approach to the sanitization of hatching eggs. The first factor is the commercial availability of essential oils [43].
The second is the potential to establish partnerships between poultry producers and aromatic plant growers, fostering the cultivation and sourcing of essential raw materials to produce these sanitizers. Although essential oils may have a higher cost compared to some synthetic products, their high efficiency at low concentrations can mitigate costs that might otherwise hinder their use [44]. The small quantity required to achieve the expected antibacterial efficacy in the process enhances their economic attractiveness.

5. Conclusions

The CCEO, SAEO and CNEO showed potential as sanitizing agents, providing an option to ensure that eggshell surfaces have a lower bacterial load, possibly including potentially pathogenic bacteria. In reducing mesophilic bacteria, CCEO was 73.39% more effective than non-sanitized eggs and 34.98% more effective than formaldehyde; SAEO was 65.73% more effective than non-sanitized eggs and 16.26% more effective than formaldehyde; CNEO was 79.64% more effective than non-sanitized eggs and 50.25% more effective than formaldehyde. This proposal aims to overcome the disadvantages associated with conventional sanitization methods that use formaldehyde/paraformaldehyde. Although CCEO, SAEO and CNEO have demonstrated antibacterial efficacy, there are still outstanding questions that require in-depth investigation, especially concerning their safety and economic viability. As essential oils are multifunctional compounds and the sanitizers that have them as active ingredients are simple to prepare and apply, and considering that some essential oil-based sanitizers have already demonstrated potential benefits, the widespread adoption of their use in hatching egg sanitization protocols would reduce the need on unsustainable products and effectively address contamination issues in poultry farming. Furthermore, the use of these natural compounds could simultaneously integrate the demands of other stages of poultry production, as well as the industrial sectors responsible for manufacturing these sanitizers, benefiting both small and large producers. In addition to natural sanitization tests at the laboratory level, researchers are encouraged to carry out future studies that evaluate its effectiveness on an industrial scale.
   
This article was originally published in Antibiotics 2024, 13, 1025. https://doi.org/10.3390/ antibiotics13111025. This is an Open Access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/)

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Authors:
Vinícius Machado dos Santos
Instituto Federal de Brasília IFB
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